Sequence Similarity Clusters for the Entities in PDB 1OY7

Entity #1 | Chains: A,B,C,D,E
Baculoviral IAP repeat-containing protein 7 protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 3720
95 % 4 4 3223 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 11 11 1672
70 % 11 11 1686
50 % 20 23 1090
40 % 32 57 389
30 % 33 58 369
Entity #2 | Chains: F
AEVVAVKSE peptide protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures