Sequence Similarity Clusters for the Entities in PDB 1OY7

Entity #1 | Chains: A,B,C,D,E
Baculoviral IAP repeat-containing protein 7 protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 3648
95 % 4 4 3164 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 11 11 1651
70 % 11 11 1664
50 % 20 23 1076
40 % 32 57 368
30 % 33 58 352
Entity #2 | Chains: F
AEVVAVKSE peptide protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.