Sequence Similarity Clusters for the Entities in PDB 1OY3

Entity #1 | Chains: B,C
Transcription factor p65 protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 23716
95 % 1 2 21240 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.5
PDBFlex
90 % 1 2 20593
70 % 1 2 18812
50 % 1 2 16307
40 % 1 2 14473
30 % 1 2 12168
Entity #2 | Chains: D
transcription factor inhibitor I-kappa-B-beta protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40379
95 % 1 2 34148 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 1 2 32633
70 % 1 2 29069
50 % 1 2 24861
40 % 1 2 21878
30 % 1 2 18268

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1OY3 2 D transcription factor inhibitor I-kappa-B-beta 10090
2 1K3Z 2 D transcription factor inhibitor I-kappa-B-beta 10090