Sequence Similarity Clusters for the Entities in PDB 1OY3

Entity #1 | Chains: B,C
Transcription factor p65 protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 23620
95 % 1 2 21158 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.5
PDBFlex
90 % 1 2 20511
70 % 1 2 18743
50 % 1 2 16244
40 % 1 2 14426
30 % 1 2 12131
Entity #2 | Chains: D
transcription factor inhibitor I-kappa-B-beta protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40241
95 % 1 2 34035 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 1 2 32526
70 % 1 2 28980
50 % 1 2 24783
40 % 1 2 21817
30 % 1 2 18217

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1OY3 2 D transcription factor inhibitor I-kappa-B-beta 10090
2 1K3Z 2 D transcription factor inhibitor I-kappa-B-beta 10090