Sequence Similarity Clusters for the Entities in PDB 1OXN

Entity #1 | Chains: A,B,C,D,E
Baculoviral IAP repeat-containing protein 7 protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 3693
95 % 1 4 3197 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 7 11 1665
70 % 7 11 1681
50 % 13 23 1084
40 % 17 57 371
30 % 17 58 357
Entity #2 | Chains: F
AEAVPWKSE peptide protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.