Sequence Similarity Clusters for the Entities in PDB 1OXD

Entity #1 | Chains: A
cyan fluorescent protein cfp protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 38486
95 % 22 228 72 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 0.6
PDBFlex
90 % 23 266 37
70 % 25 270 47
50 % 25 271 82
40 % 25 272 100
30 % 35 485 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.