Sequence Similarity Clusters for the Entities in PDB 1OX9

Entity #1 | Chains: A,B,C,D,E,F,G,H
Stringent starvation protein B protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 3944
95 % 3 3 4711 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 3 3 4725
70 % 3 3 4634
50 % 7 7 3049
40 % 7 7 2969
30 % 7 7 2782
Entity #2 | Chains: I,J,K,L,M,N,O,P
ssrA protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.