Sequence Similarity Clusters for the Entities in PDB 1OX9

Entity #1 | Chains: A,B,C,D,E,F,G,H
Stringent starvation protein B protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 4302
95 % 3 3 5105 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 3 3 5124
70 % 3 3 4998
50 % 7 7 3260
40 % 7 7 3165
30 % 7 7 2968
Entity #2 | Chains: I,J,K,L,M,N,O,P
ssrA protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures