Sequence Similarity Clusters for the Entities in PDB 1OX1

Entity #1 | Chains: A
Trypsinogen, cationic protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 353 425 32
95 % 386 471 19 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 386 471 22
70 % 431 558 19
50 % 476 708 14
40 % 991 1873 4
30 % 997 1887 7
Entity #2 | Chains: B
11-mer peptide protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures