Sequence Similarity Clusters for the Entities in PDB 1OX1

Entity #1 | Chains: A
Trypsinogen, cationic protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 322 384 40
95 % 364 443 33 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 364 443 34
70 % 408 527 19
50 % 453 678 14
40 % 907 1685 4
30 % 968 1834 6
Entity #2 | Chains: B
11-mer peptide protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.