Sequence Similarity Clusters for the Entities in PDB 1OWR

Entity #1 | Chains: A,C,E,G
NFAT1 Monomeric Binding Site, Plus Strand dna, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B,D,F,H
NFAT1 Monomeric Binding Site, Minus Strand dna, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: M,N,P,Q
Nuclear factor of activated T-cells, cytoplasmic 2 protein, length: 284 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 2302
95 % 6 8 2680 Flexibility: Medium
Max RMSD: 16.6, Avg RMSD: 9.8
PDBFlex
90 % 6 8 2729
70 % 6 8 2710
50 % 6 8 2675
40 % 7 9 2360
30 % 7 9 2254

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures