Sequence Similarity Clusters for the Entities in PDB 1OWJ

Entity #1 | Chains: A
Urokinase-type plasminogen activator protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 8 4120
95 % 111 112 326 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.6
PDBFlex
90 % 111 112 344
70 % 116 117 370
50 % 116 117 430
40 % 1829 1863 4
30 % 1848 1885 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures