Sequence Similarity Clusters for the Entities in PDB 1OWD

Entity #1 | Chains: A
Urokinase-type plasminogen activator protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 23 27 1835
95 % 105 112 321 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.6
PDBFlex
90 % 105 112 336
70 % 109 117 358
50 % 109 117 418
40 % 1707 1855 4
30 % 1716 1869 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures