Sequence Similarity Clusters for the Entities in PDB 1OW3

Entity #1 | Chains: A
Rho-GTPase-activating protein 1 protein, length: 242 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 38942
95 % 1 5 10430 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 5 10303
70 % 1 5 9796
50 % 1 5 8883
40 % 1 5 8130
30 % 1 5 7167
Entity #2 | Chains: B
Transforming protein RhoA protein, length: 193 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 16 1967
95 % 11 43 688 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 1.5
PDBFlex
90 % 11 43 714
70 % 11 45 713
50 % 20 137 193
40 % 21 138 208
30 % 200 782 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.