Sequence Similarity Clusters for the Entities in PDB 1OW3

Entity #1 | Chains: A
Rho-GTPase-activating protein 1 protein, length: 242 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 39517
95 % 1 5 10571 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 5 10440
70 % 1 5 9930
50 % 1 5 9006
40 % 1 5 8241
30 % 1 5 7260
Entity #2 | Chains: B
Transforming protein RhoA protein, length: 193 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 15 2005
95 % 12 45 655 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 1.5
PDBFlex
90 % 12 45 681
70 % 12 47 684
50 % 21 143 192
40 % 22 144 202
30 % 207 812 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures