Sequence Similarity Clusters for the Entities in PDB 1OW3

Entity #1 | Chains: A
Rho-GTPase-activating protein 1 protein, length: 242 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 45032
95 % 1 5 10904 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 5 10741
70 % 1 5 10153
50 % 1 5 9145
40 % 1 5 8279
30 % 1 5 7164
Entity #2 | Chains: B
Transforming protein RhoA protein, length: 193 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 15 2437
95 % 12 45 671 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 1.5
PDBFlex
90 % 12 45 689
70 % 12 47 698
50 % 22 145 194
40 % 22 145 211
30 % 217 834 13

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures