Sequence Similarity Clusters for the Entities in PDB 1OVO

Entity #1 | Chains: A,B,C,D
OVOMUCOID THIRD DOMAIN protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 16829
95 % 2 2 15672 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.1
PDBFlex
90 % 44 44 1166
70 % 44 44 1192
50 % 47 47 1163
40 % 48 48 1161
30 % 49 49 1113

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures