Sequence Similarity Clusters for the Entities in PDB 1OVL

Entity #1 | Chains: A,D
Orphan nuclear receptor NURR1 (MSE 414, 496, 511) protein, length: 271 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 12448
95 % 1 2 12064 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 1 2 11898
70 % 1 2 11243
50 % 10 19 1382
40 % 10 19 1387
30 % 586 992 10
Entity #2 | Chains: B,C,E,F
Orphan nuclear receptor NURR1 (MSE 496, 511) protein, length: 271 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 12448
95 % 2 2 12064 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 2 2 11898
70 % 2 2 11243
50 % 11 19 1382
40 % 11 19 1387
30 % 587 992 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.