Sequence Similarity Clusters for the Entities in PDB 1OVL

Entity #1 | Chains: A,D
Orphan nuclear receptor NURR1 (MSE 414, 496, 511) protein, length: 271 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 12930
95 % 1 2 12495 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 1 2 12319
70 % 1 2 11631
50 % 10 19 1425
40 % 10 19 1429
30 % 600 1019 10
Entity #2 | Chains: B,C,E,F
Orphan nuclear receptor NURR1 (MSE 496, 511) protein, length: 271 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 12930
95 % 2 2 12495 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 2 2 12319
70 % 2 2 11631
50 % 11 19 1425
40 % 11 19 1429
30 % 601 1019 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures