Sequence Similarity Clusters for the Entities in PDB 1OVL

Entity #1 | Chains: A,D
Orphan nuclear receptor NURR1 (MSE 414, 496, 511) protein, length: 271 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 12734
95 % 1 2 12313 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 1 2 12142
70 % 1 2 11472
50 % 10 19 1413
40 % 10 19 1419
30 % 594 1006 10
Entity #2 | Chains: B,C,E,F
Orphan nuclear receptor NURR1 (MSE 496, 511) protein, length: 271 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 12734
95 % 2 2 12313 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 2 2 12142
70 % 2 2 11472
50 % 11 19 1413
40 % 11 19 1419
30 % 595 1006 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures