Sequence Similarity Clusters for the Entities in PDB 1OVA

Entity #1 | Chains: A
OVALBUMIN protein, length: 386 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 7821
95 % 1 5 6458 Flexibility: Medium
Max RMSD: 9.2, Avg RMSD: 3.5
PDBFlex
90 % 1 5 6437
70 % 1 6 4718
50 % 1 6 4541
40 % 22 97 347
30 % 29 178 179
Entity #2 | Chains: B
OVALBUMIN protein, length: 386 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 7821
95 % 2 5 6458 Flexibility: Medium
Max RMSD: 9.2, Avg RMSD: 3.5
PDBFlex
90 % 2 5 6437
70 % 2 6 4718
50 % 2 6 4541
40 % 23 97 347
30 % 30 178 179
Entity #3 | Chains: C,D
OVALBUMIN protein, length: 386 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 7821
95 % 3 5 6458 Flexibility: Medium
Max RMSD: 9.2, Avg RMSD: 3.5
PDBFlex
90 % 3 5 6437
70 % 3 6 4718
50 % 3 6 4541
40 % 24 97 347
30 % 31 178 179

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.