Sequence Similarity Clusters for the Entities in PDB 1OTU

Entity #1 | Chains: A,B
Voltage-gated ClC-type chloride channel eriC protein, length: 465 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 15901
95 % 37 40 451
90 % 37 40 481
70 % 38 41 477
50 % 38 41 559
40 % 39 43 563
30 % 39 43 562
Entity #2 | Chains: C,E
Fab fragment (Heavy chain) protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 37 387
95 % 35 37 546
90 % 36 38 556
70 % 1937 2041 1
50 % 4001 4220 1
40 % 4002 4221 1
30 % 4732 4972 1
Entity #3 | Chains: D,F
Fab fragment (Light chain) protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 37 388
95 % 35 37 547
90 % 132 141 137
70 % 1647 1729 2
50 % 4002 4220 1
40 % 4003 4221 1
30 % 4733 4972 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.