Sequence Similarity Clusters for the Entities in PDB 1OTT

Entity #1 | Chains: A,B
Voltage-gated ClC-type chloride channel eriC protein, length: 465 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 11217
95 % 31 40 528
90 % 31 40 561
70 % 32 41 555
50 % 32 41 605
40 % 33 43 609
30 % 33 43 600
Entity #2 | Chains: C,E
Fab fragment (Heavy chain) protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 29 37 443
95 % 29 37 614
90 % 30 38 622
70 % 2043 2238 2
50 % 4217 4619 1
40 % 4217 4619 1
30 % 4992 5440 1
Entity #3 | Chains: D,F
Fab fragment (Light chain) protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 29 37 444
95 % 29 37 615
90 % 124 145 141
70 % 2079 2280 1
50 % 4218 4619 1
40 % 4218 4619 1
30 % 4993 5440 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.