Sequence Similarity Clusters for the Entities in PDB 1OTT

Entity #1 | Chains: A,B
Voltage-gated ClC-type chloride channel eriC protein, length: 465 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 10861
95 % 31 40 498
90 % 31 40 535
70 % 32 41 517
50 % 32 41 580
40 % 33 43 586
30 % 33 43 579
Entity #2 | Chains: C,E
Fab fragment (Heavy chain) protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 29 37 414
95 % 29 37 583
90 % 30 38 588
70 % 1973 2145 1
50 % 4079 4435 1
40 % 4079 4435 1
30 % 4827 5225 1
Entity #3 | Chains: D,F
Fab fragment (Light chain) protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 29 37 415
95 % 29 37 584
90 % 124 145 139
70 % 1668 1803 2
50 % 4080 4435 1
40 % 4080 4435 1
30 % 4828 5225 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.