Sequence Similarity Clusters for the Entities in PDB 1OTT

Entity #1 | Chains: A,B
Voltage-gated ClC-type chloride channel eriC protein, length: 465 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 10384
95 % 30 39 431
90 % 30 39 459
70 % 31 40 478
50 % 31 40 557
40 % 32 42 569
30 % 32 42 572
Entity #2 | Chains: C,E
Fab fragment (Heavy chain) protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 36 365
95 % 28 36 543
90 % 29 37 536
70 % 1857 2010 1
50 % 3837 4154 1
40 % 3838 4155 1
30 % 4543 4901 1
Entity #3 | Chains: D,F
Fab fragment (Light chain) protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 36 366
95 % 28 36 544
90 % 121 140 137
70 % 1584 1704 2
50 % 3838 4154 1
40 % 3839 4155 1
30 % 4544 4901 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.