Sequence Similarity Clusters for the Entities in PDB 1OTT

Entity #1 | Chains: A,B
Voltage-gated ClC-type chloride channel eriC protein, length: 465 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 10492
95 % 30 39 450
90 % 30 39 479
70 % 31 40 487
50 % 31 40 572
40 % 32 42 584
30 % 32 42 583
Entity #2 | Chains: C,E
Fab fragment (Heavy chain) protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 36 392
95 % 28 36 568
90 % 29 37 573
70 % 1880 2036 1
50 % 3887 4210 1
40 % 3888 4211 1
30 % 4598 4962 1
Entity #3 | Chains: D,F
Fab fragment (Light chain) protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 36 393
95 % 28 36 569
90 % 121 140 139
70 % 1603 1726 2
50 % 3888 4210 1
40 % 3889 4211 1
30 % 4599 4962 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.