Sequence Similarity Clusters for the Entities in PDB 1OTT

Entity #1 | Chains: A,B
Voltage-gated ClC-type chloride channel eriC protein, length: 465 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 11581
95 % 31 40 555
90 % 31 40 584
70 % 32 41 578
50 % 32 41 619
40 % 33 43 626
30 % 33 43 611
Entity #2 | Chains: C,E
Fab fragment (Heavy chain) protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 29 37 457
95 % 29 37 634
90 % 30 38 644
70 % 2136 2342 2
50 % 4419 4843 1
40 % 4419 4843 1
30 % 5235 5705 1
Entity #3 | Chains: D,F
Fab fragment (Light chain) protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 29 37 458
95 % 29 37 635
90 % 127 148 140
70 % 2180 2392 1
50 % 4420 4843 1
40 % 4420 4843 1
30 % 5236 5705 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures