Sequence Similarity Clusters for the Entities in PDB 1OTR

Entity #1 | Chains: A
protein Cue2 protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74252
95 % 1 1 51573
90 % 1 1 48911
70 % 1 1 42885
50 % 1 1 36576
40 % 1 1 32191
30 % 1 1 27217
Entity #2 | Chains: B
Ubiquitin protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 14 2153
95 % 393 396 5
90 % 418 423 6
70 % 441 446 8
50 % 461 467 11
40 % 484 491 16
30 % 977 1044 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures