Sequence Similarity Clusters for the Entities in PDB 1OTR

Entity #1 | Chains: A
protein Cue2 protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 75563
95 % 1 1 52429
90 % 1 1 49686
70 % 1 1 43543
50 % 1 1 37115
40 % 1 1 32666
30 % 1 1 27607
Entity #2 | Chains: B
Ubiquitin protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 14 2209
95 % 407 410 5
90 % 432 437 6
70 % 455 460 8
50 % 475 481 11
40 % 498 505 15
30 % 995 1062 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures