Sequence Similarity Clusters for the Entities in PDB 1OTR

Entity #1 | Chains: A
protein Cue2 protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 48236
95 % 1 1 40016
90 % 1 1 38128
70 % 1 1 33740
50 % 1 1 28662
40 % 1 1 25121
30 % 1 1 20926
Entity #2 | Chains: B
Ubiquitin protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 396 401 4
95 % 420 425 5
90 % 433 438 6
70 % 466 471 8
50 % 486 492 10
40 % 511 518 15
30 % 674 685 18

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures