Sequence Similarity Clusters for the Entities in PDB 1OTP

Entity #1 | Chains: A
THYMIDINE PHOSPHORYLASE protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 7681
95 % 10 12 3300 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.1
PDBFlex
90 % 10 12 3347
70 % 10 12 3309
50 % 10 12 3232
40 % 17 20 1535
30 % 17 21 1428

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.