Sequence Similarity Clusters for the Entities in PDB 1OTM

Entity #1 | Chains: A
internalin B protein, length: 236 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59831
95 % 3 4 18323
90 % 3 4 17945
70 % 3 4 16659
50 % 7 14 2703
40 % 8 15 2386
30 % 8 15 2280

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures