Sequence Similarity Clusters for the Entities in PDB 1OTM

Entity #1 | Chains: A
internalin B protein, length: 236 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 57489
95 % 3 4 17504 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 3 4 17141
70 % 3 4 15926
50 % 7 14 2587
40 % 8 15 2282
30 % 8 15 2195

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.