Sequence Similarity Clusters for the Entities in PDB 1OTC

Entity #1 | Chains: D
DNA (5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3') dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
PROTEIN (TELOMERE-BINDING PROTEIN ALPHA SUBUNIT) protein, length: 495 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 15 3471
95 % 14 15 4250
90 % 14 15 4280
70 % 14 15 4208
50 % 14 15 4057
40 % 14 15 3882
30 % 14 15 3595
Entity #3 | Chains: B
PROTEIN (TELOMERE-BINDING PROTEIN BETA SUBUNIT) protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 37586
95 % 2 2 29153
90 % 2 2 28141
70 % 2 2 25429
50 % 2 2 21780
40 % 2 2 19188
30 % 2 2 16281

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.