Sequence Similarity Clusters for the Entities in PDB 1OT8

Entity #1 | Chains: A,B,C
Neurogenic locus Notch protein protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 27422
95 % 1 1 24165 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.8
PDBFlex
90 % 1 1 23342
70 % 3 6 6633
50 % 3 6 6168
40 % 3 6 5740
30 % 133 347 42

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures