Sequence Similarity Clusters for the Entities in PDB 1OT8

Entity #1 | Chains: A,B,C
Neurogenic locus Notch protein protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 26382
95 % 1 1 23252 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.8
PDBFlex
90 % 1 1 22501
70 % 3 6 6387
50 % 3 6 5960
40 % 3 6 5544
30 % 124 327 41

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures