Sequence Similarity Clusters for the Entities in PDB 1OSZ

Entity #1 | Chains: A
MHC CLASS I H-2KB HEAVY CHAIN protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 23 49 435
95 % 35 65 414 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.1
PDBFlex
90 % 37 70 389
70 % 435 736 6
50 % 444 750 6
40 % 467 792 10
30 % 506 923 15
Entity #2 | Chains: B
BETA-2 MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 61 136 98
95 % 98 234 63 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.6
PDBFlex
90 % 98 234 66
70 % 525 940 4
50 % 537 962 3
40 % 537 962 7
30 % 537 962 12
Entity #3 | Chains: C
VESICULAR STOMATITIS VIRUS NUCLEOPROTEIN protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures