Sequence Similarity Clusters for the Entities in PDB 1OSP

Entity #1 | Chains: L
FAB 184.1 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 63130
95 % 2 8 6852 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.5
PDBFlex
90 % 3 13 3487
70 % 677 2516 1
50 % 1390 5101 1
40 % 1629 5750 1
30 % 1994 7168 1
Entity #2 | Chains: H
FAB 184.1 protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 55822
95 % 1 1 45823
90 % 2 3 19242
70 % 670 2475 2
50 % 1391 5101 1
40 % 1630 5750 1
30 % 1995 7168 1
Entity #3 | Chains: O
OUTER SURFACE PROTEIN A protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 27377
95 % 1 2 24021 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 18 19 3082
70 % 22 28 1764
50 % 22 28 1790
40 % 22 28 1776
30 % 22 28 1737

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures