Sequence Similarity Clusters for the Entities in PDB 1OSP

Entity #1 | Chains: L
FAB 184.1 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60252
95 % 2 8 7006 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.4
PDBFlex
90 % 3 11 4420
70 % 606 2287 1
50 % 1244 4633 1
40 % 1244 4633 1
30 % 1387 5461 1
Entity #2 | Chains: H
FAB 184.1 protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59768
95 % 1 1 41970
90 % 1 1 39999
70 % 599 2244 2
50 % 1245 4633 1
40 % 1245 4633 1
30 % 1388 5461 1
Entity #3 | Chains: O
OUTER SURFACE PROTEIN A protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 26874
95 % 1 2 22487 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 18 19 2954
70 % 18 19 2930
50 % 18 19 2894
40 % 18 19 2858
30 % 18 19 2663

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.