Sequence Similarity Clusters for the Entities in PDB 1OSP

Entity #1 | Chains: L
FAB 184.1 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 61030
95 % 2 8 7102 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.5
PDBFlex
90 % 3 11 4494
70 % 627 2362 1
50 % 1287 4781 1
40 % 1287 4781 1
30 % 1434 5635 1
Entity #2 | Chains: H
FAB 184.1 protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60532
95 % 1 1 42520
90 % 1 1 40488
70 % 619 2311 2
50 % 1288 4781 1
40 % 1288 4781 1
30 % 1435 5635 1
Entity #3 | Chains: O
OUTER SURFACE PROTEIN A protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 27194
95 % 1 2 22746 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 18 19 3005
70 % 18 19 2974
50 % 18 19 2928
40 % 18 19 2887
30 % 18 19 2695

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures