Sequence Similarity Clusters for the Entities in PDB 1OSB

Entity #1 | Chains: B,D
Dna oligonucleotide dna, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,C
TrwC protein protein, length: 293 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 8610
95 % 4 7 6886 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 4 7 6867
70 % 4 7 6705
50 % 6 9 4433
40 % 6 9 4221
30 % 7 13 2550

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.