Sequence Similarity Clusters for the Entities in PDB 1ORP

Entity #1 | Chains: B
5'-D(*AP*AP*GP*AP*CP*AP*TP*GP*GP*AP*C)-3' dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: C
5'-D(*GP*TP*CP*CP*AP*(PED)P*GP*TP*CP*T)-3' dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
Endonuclease III protein, length: 226 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 39282
95 % 2 3 22635
90 % 2 3 21963
70 % 2 3 20131
50 % 2 3 17449
40 % 2 3 15559
30 % 2 3 13297

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.