Sequence Similarity Clusters for the Entities in PDB 1ORN

Entity #1 | Chains: B
5'-D(*AP*AP*GP*AP*CP*GP*TP*GP*GP*AP*C)-3' dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: C
5'-D(*T*GP*TP*CP*CP*AP*(PED)P*GP*TP*CP*T)-3' dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
Endonuclease III protein, length: 226 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 36504
95 % 1 3 20990
90 % 1 3 20387
70 % 1 3 18788
50 % 1 3 16353
40 % 1 3 14599
30 % 1 3 12475

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.