Sequence Similarity Clusters for the Entities in PDB 1OR7

Entity #1 | Chains: A,B
RNA polymerase sigma-E factor protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 42570
95 % 1 1 32283
90 % 1 1 30867
70 % 1 1 27547
50 % 1 1 23501
40 % 1 1 20678
30 % 2 4 7322
Entity #2 | Chains: C,F
Sigma-E factor negative regulatory protein protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 48295
95 % 1 1 36041
90 % 1 1 34417
70 % 1 1 30583
50 % 1 1 26128
40 % 1 1 23035
30 % 1 1 19510

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures