Sequence Similarity Clusters for the Entities in PDB 1OR7

Entity #1 | Chains: A,B
RNA polymerase sigma-E factor protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41626
95 % 1 1 34980 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 1 1 33427
70 % 1 1 29803
50 % 1 1 25428
40 % 1 1 22332
30 % 2 4 7365
Entity #2 | Chains: C,F
Sigma-E factor negative regulatory protein protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36592
95 % 1 1 31156 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 1 29568
70 % 1 1 29802
50 % 1 1 25427
40 % 1 1 22331
30 % 1 1 18617

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures