Sequence Similarity Clusters for the Entities in PDB 1OR7

Entity #1 | Chains: A,B
RNA polymerase sigma-E factor protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41931
95 % 1 1 31812 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 1 1 30433
70 % 1 1 27187
50 % 1 1 23194
40 % 1 1 20415
30 % 2 4 7225
Entity #2 | Chains: C,F
Sigma-E factor negative regulatory protein protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 47604
95 % 1 1 35535 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 1 33955
70 % 1 1 30199
50 % 1 1 25805
40 % 1 1 22756
30 % 1 1 19276

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.