Sequence Similarity Clusters for the Entities in PDB 1OQX

Entity #1 | Chains: A,B
immunoglobulin gamma-1 heavy chain constant region protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 22 28 544
95 % 99 160 113 Flexibility: Low
Max RMSD: 5.2, Avg RMSD: 1.4
PDBFlex
90 % 106 169 92
70 % 107 170 108
50 % 112 181 141
40 % 112 181 153
30 % 3431 5780 1
Entity #2 | Chains: C,D
Protein A Z34C protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 4293
95 % 4 8 5086 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 4 8 5100
70 % 4 8 4981
50 % 4 9 4394
40 % 4 9 4190
30 % 4 9 3862

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures