Sequence Similarity Clusters for the Entities in PDB 1OQX

Entity #1 | Chains: A,B
immunoglobulin gamma-1 heavy chain constant region protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 22 28 529
95 % 99 160 92 Flexibility: Low
Max RMSD: 5.2, Avg RMSD: 1.4
PDBFlex
90 % 106 169 88
70 % 107 170 104
50 % 110 179 138
40 % 110 179 151
30 % 3282 5571 1
Entity #2 | Chains: C,D
Protein A Z34C protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 4186
95 % 4 8 4960 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 4 8 4976
70 % 4 8 4867
50 % 4 9 4304
40 % 4 9 4108
30 % 4 9 3793

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.