Sequence Similarity Clusters for the Entities in PDB 1OQX

Entity #1 | Chains: A,B
immunoglobulin gamma-1 heavy chain constant region protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 21 26 558
95 % 91 147 114 Flexibility: Low
Max RMSD: 5.2, Avg RMSD: 1.4
PDBFlex
90 % 95 153 114
70 % 96 154 127
50 % 99 161 145
40 % 99 161 161
30 % 3162 5342 1
Entity #2 | Chains: C,D
Protein A Z34C protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 7 4251
95 % 4 7 5040
90 % 4 7 5058
70 % 4 7 5003
50 % 4 8 4509
40 % 4 8 4283
30 % 4 8 3935

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.