Sequence Similarity Clusters for the Entities in PDB 1OQS

Entity #1 | Chains: A,C,E,G
Phospholipase A2 RV-7 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 22049
95 % 1 1 18881
90 % 5 5 7426
70 % 5 6 4798
50 % 88 169 138
40 % 148 295 95
30 % 148 295 109
Entity #2 | Chains: B,D,F,H
Phospholipase A2 RV-4 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 22050
95 % 1 1 18882
90 % 3 5 5662
70 % 3 5 5541
50 % 89 169 138
40 % 149 295 95
30 % 149 295 109

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.