Sequence Similarity Clusters for the Entities in PDB 1OQS

Entity #1 | Chains: A,C,E,G
Phospholipase A2 RV-7 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 23460
95 % 1 1 20094 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 5 5 7941
70 % 5 6 5132
50 % 88 170 147
40 % 148 296 101
30 % 148 296 112
Entity #2 | Chains: B,D,F,H
Phospholipase A2 RV-4 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 23461
95 % 1 1 20095 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 3 5 6073
70 % 3 5 5926
50 % 89 170 147
40 % 149 296 101
30 % 149 296 112

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.