Sequence Similarity Clusters for the Entities in PDB 1OQP

Entity #1 | Chains: A
Caltractin protein, length: 77 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51312
95 % 1 1 49465
90 % 1 1 46936
70 % 3 3 21926
50 % 3 3 18834
40 % 61 88 610
30 % 67 96 569
Entity #2 | Chains: B
Cell division control protein KAR1 protein, length: 19 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures