Sequence Similarity Clusters for the Entities in PDB 1OQP

Entity #1 | Chains: A
Caltractin protein, length: 77 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 71952
95 % 1 1 49873
90 % 1 1 47300
70 % 3 3 21844
50 % 3 3 18898
40 % 60 87 594
30 % 65 94 546
Entity #2 | Chains: B
Cell division control protein KAR1 protein, length: 19 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures