Sequence Similarity Clusters for the Entities in PDB 1OQL

Entity #1 | Chains: A
MISTLETOE LECTIN I protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 52199
95 % 2 2 29661 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 13 13 5623
70 % 13 18 3765
50 % 13 18 3676
40 % 156 170 293
30 % 198 212 236
Entity #2 | Chains: B
MISTLETOE LECTIN I protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 62162
95 % 13 13 5598 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 13 18 3822
70 % 13 18 3867
50 % 20 26 2329
40 % 40 50 1175
30 % 40 50 1152

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures