Sequence Similarity Clusters for the Entities in PDB 1OQL

Entity #1 | Chains: A
MISTLETOE LECTIN I protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51497
95 % 2 2 29176 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 13 13 5515
70 % 13 18 3691
50 % 13 18 3602
40 % 156 170 283
30 % 198 212 232
Entity #2 | Chains: B
MISTLETOE LECTIN I protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 61372
95 % 13 13 5320 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 13 18 3753
70 % 13 18 3794
50 % 20 26 2288
40 % 39 48 1203
30 % 39 48 1191

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures