Sequence Similarity Clusters for the Entities in PDB 1OQL

Entity #1 | Chains: A
MISTLETOE LECTIN I protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 53272
95 % 2 2 30295 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 13 13 5761
70 % 13 18 3849
50 % 13 18 3739
40 % 156 170 308
30 % 198 212 245
Entity #2 | Chains: B
MISTLETOE LECTIN I protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 63374
95 % 13 13 5602 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 13 18 3916
70 % 13 18 3957
50 % 20 26 2379
40 % 40 50 1201
30 % 40 50 1181

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures