Sequence Similarity Clusters for the Entities in PDB 1OQL

Entity #1 | Chains: A
MISTLETOE LECTIN I protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 54410
95 % 2 2 30960 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 13 13 5886
70 % 13 18 3943
50 % 13 18 3805
40 % 160 174 314
30 % 202 216 248
Entity #2 | Chains: B
MISTLETOE LECTIN I protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 64674
95 % 13 13 5878 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 13 18 4027
70 % 13 18 4058
50 % 20 26 2434
40 % 40 50 1230
30 % 40 50 1207

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures