Sequence Similarity Clusters for the Entities in PDB 1OQL

Entity #1 | Chains: A
MISTLETOE LECTIN I protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59483
95 % 2 2 30274
90 % 12 12 5849
70 % 12 17 3816
50 % 12 17 3709
40 % 66 79 624
30 % 196 210 214
Entity #2 | Chains: B
MISTLETOE LECTIN I protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 58709
95 % 12 12 5808 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 12 17 3872
70 % 12 17 3812
50 % 19 25 2265
40 % 38 47 1190
30 % 38 47 1172

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures