Sequence Similarity Clusters for the Entities in PDB 1OQF

Entity #1 | Chains: A,B
2-methylisocitrate lyase protein, length: 295 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 5400
95 % 3 4 5695 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.6
PDBFlex
90 % 3 6 3233
70 % 3 6 3189
50 % 3 7 1642
40 % 4 9 1460
30 % 13 23 666

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures