Sequence Similarity Clusters for the Entities in PDB 1OQD

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J
Tumor necrosis factor ligand superfamily member 13B, soluble form protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 6 247
95 % 2 6 343
90 % 2 6 369
70 % 2 6 405
50 % 2 6 477
40 % 2 6 515
30 % 2 6 517
Entity #2 | Chains: K,L,M,N,O,P,Q,R
Tumor necrosis factor receptor superfamily member 17 protein, length: 39 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 9348
95 % 1 1 9399
90 % 1 1 9292
70 % 1 1 8839
50 % 1 1 8026
40 % 1 1 7366
30 % 1 1 6511

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.