Sequence Similarity Clusters for the Entities in PDB 1OQC

Entity #1 | Chains: A,B,C,D
augmenter of liver regeneration protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 24262
95 % 1 1 20717 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 1 20135
70 % 3 9 3929
50 % 3 9 3824
40 % 3 11 2992
30 % 3 11 2799

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures