Sequence Similarity Clusters for the Entities in PDB 1OQC

Entity #1 | Chains: A,B,C,D
augmenter of liver regeneration protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 23733
95 % 1 1 20307 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 1 19751
70 % 3 9 3835
50 % 3 9 3735
40 % 3 11 2938
30 % 3 11 2750

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures