Sequence Similarity Clusters for the Entities in PDB 1OPX

Entity #1 | Chains: A,B
virB11 homolog protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 2835
95 % 4 5 3532 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 1.6
PDBFlex
90 % 4 5 3581
70 % 4 5 3533
50 % 4 5 3445
40 % 4 5 3330
30 % 4 5 3125

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures