Sequence Similarity Clusters for the Entities in PDB 1OPX

Entity #1 | Chains: A,B
virB11 homolog protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 2900
95 % 4 5 3610 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 1.6
PDBFlex
90 % 4 5 3673
70 % 4 5 3626
50 % 4 5 3535
40 % 4 5 3411
30 % 4 5 3200

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures