Sequence Similarity Clusters for the Entities in PDB 1OPH

Entity #1 | Chains: A
Alpha-1-antitrypsin precursor protein, length: 394 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 33496
95 % 7 26 1932 Flexibility: Medium
Max RMSD: 17.3, Avg RMSD: 4.7
PDBFlex
90 % 7 26 1977
70 % 7 26 1995
50 % 17 48 881
40 % 50 97 374
30 % 68 178 183
Entity #2 | Chains: B
Trypsinogen, cationic precursor protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 58241
95 % 418 443 33 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 418 443 34
70 % 486 527 19
50 % 589 678 14
40 % 1331 1685 4
30 % 1432 1834 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.