Sequence Similarity Clusters for the Entities in PDB 1OPH

Entity #1 | Chains: A
Alpha-1-antitrypsin precursor protein, length: 394 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 34242
95 % 7 26 1971 Flexibility: Medium
Max RMSD: 17.3, Avg RMSD: 4.9
PDBFlex
90 % 7 26 2019
70 % 7 26 2043
50 % 17 48 899
40 % 50 97 400
30 % 68 178 185
Entity #2 | Chains: B
Trypsinogen, cationic precursor protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59449
95 % 435 462 20 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 435 462 21
70 % 503 546 19
50 % 606 697 14
40 % 1354 1719 4
30 % 1455 1869 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures