Sequence Similarity Clusters for the Entities in PDB 1OPH

Entity #1 | Chains: A
Alpha-1-antitrypsin precursor protein, length: 394 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 32913
95 % 7 26 1907 Flexibility: Medium
Max RMSD: 17.3, Avg RMSD: 4.7
PDBFlex
90 % 7 26 1953
70 % 7 26 1970
50 % 17 48 872
40 % 50 97 366
30 % 68 178 180
Entity #2 | Chains: B
Trypsinogen, cationic precursor protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 57413
95 % 417 442 31 Flexibility: No
Max RMSD: 2.2, Avg RMSD: 0.4
PDBFlex
90 % 417 442 33
70 % 485 526 18
50 % 588 677 14
40 % 1328 1682 4
30 % 1429 1831 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.