Sequence Similarity Clusters for the Entities in PDB 1OPF

Entity #1 | Chains: A,B,C,D,E,F
MATRIX PORIN OUTER MEMBRANE PROTEIN F protein, length: 340 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 21 447
95 % 26 32 503 Flexibility: No
Max RMSD: 1.1, Avg RMSD: 0.4
PDBFlex
90 % 26 32 537
70 % 26 32 579
50 % 38 53 316
40 % 38 53 331
30 % 38 53 341

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.