Sequence Similarity Clusters for the Entities in PDB 1OPD

Entity #1 | Chains: A
HISTIDINE-CONTAINING PROTEIN protein, length: 85 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 14 3694
95 % 2 18 3148 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 2 18 3200
70 % 2 18 3140
50 % 2 18 3095
40 % 2 52 731
30 % 2 55 691

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures