Sequence Similarity Clusters for the Entities in PDB 1OPB

Entity #1 | Chains: A,B,C,D
CELLULAR RETINOL BINDING PROTEIN II protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 9769
95 % 1 4 9870 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 25 32 635
70 % 27 34 658
50 % 39 53 532
40 % 116 210 151
30 % 345 742 22

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures