Sequence Similarity Clusters for the Entities in PDB 1OPB

Entity #1 | Chains: A,B,C,D
CELLULAR RETINOL BINDING PROTEIN II protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 9231
95 % 1 4 9357 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 25 30 742
70 % 27 32 753
50 % 38 50 588
40 % 111 201 153
30 % 337 727 21

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.