Sequence Similarity Clusters for the Entities in PDB 1OP8

Entity #1 | Chains: A,B,C,D,E,F
Granzyme A protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 12447
95 % 2 2 10202 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.7
PDBFlex
90 % 2 2 10082
70 % 2 2 9575
50 % 2 2 8696
40 % 1514 1682 4
30 % 1636 1831 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.