Sequence Similarity Clusters for the Entities in PDB 1OP3

Entity #1 | Chains: K,L
FAB 2G12, light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 15 1030
95 % 2 15 1412 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 0.7
PDBFlex
90 % 96 721 3
70 % 326 2329 1
50 % 666 4717 1
40 % 666 4717 1
30 % 723 5571 1
Entity #2 | Chains: H,M
FAB 2G12, heavy chain protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 13 1335
95 % 2 14 1733 Flexibility: Low
Max RMSD: 12.8, Avg RMSD: 1.8
PDBFlex
90 % 2 15 1432
70 % 325 2282 2
50 % 667 4717 1
40 % 667 4717 1
30 % 724 5571 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.