Sequence Similarity Clusters for the Entities in PDB 1OO8

Entity #1 | Chains: A
Alpha-1-antitrypsin precursor protein, length: 394 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 39558
95 % 13 28 1921 Flexibility: Medium
Max RMSD: 17.3, Avg RMSD: 4.9
PDBFlex
90 % 13 28 1965
70 % 13 28 1982
50 % 32 50 904
40 % 85 125 271
30 % 104 186 186

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures