Sequence Similarity Clusters for the Entities in PDB 1OO2

Entity #1 | Chains: A,B,C,D
transthyretin protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 23540
95 % 1 4 4232 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 1 4 4260
70 % 1 4 4187
50 % 109 301 20
40 % 109 301 32
30 % 109 313 40

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.