Sequence Similarity Clusters for the Entities in PDB 1OO0

Entity #1 | Chains: A
Mago nashi protein protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 12289
95 % 1 4 11802 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.1
PDBFlex
90 % 1 11 3760
70 % 1 11 3684
50 % 1 11 3606
40 % 1 11 3442
30 % 1 11 3167
Entity #2 | Chains: B
CG8781-PA protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60808
95 % 1 1 40147
90 % 1 1 38258
70 % 1 1 35059
50 % 1 2 18448
40 % 1 2 16299
30 % 1 2 13655

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures