Sequence Similarity Clusters for the Entities in PDB 1ONV

Entity #1 | Chains: A
Transcription initiation factor IIF, alpha subunit protein, length: 82 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 49566
95 % 1 2 36967
90 % 1 2 35275
70 % 1 2 31327
50 % 1 2 26743
40 % 1 2 23589
30 % 1 2 19970
Entity #2 | Chains: B
serine phosphatase FCP1a protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73414
95 % 1 1 50730
90 % 1 1 48060
70 % 1 1 42086
50 % 1 1 35866
40 % 1 1 31616
30 % 1 1 26662

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures