Sequence Similarity Clusters for the Entities in PDB 1ONV

Entity #1 | Chains: A
Transcription initiation factor IIF, alpha subunit protein, length: 82 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 42337
95 % 1 2 26997
90 % 1 2 26013
70 % 1 2 23537
50 % 1 2 20185
40 % 1 2 17804
30 % 1 2 14679
Entity #2 | Chains: B
serine phosphatase FCP1a protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 46852
95 % 1 1 38925
90 % 1 1 37118
70 % 1 1 32900
50 % 1 1 27944
40 % 1 1 24497
30 % 1 1 20400

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures