Sequence Similarity Clusters for the Entities in PDB 1ONQ

Entity #1 | Chains: A,C
T-cell surface glycoprotein CD1a protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 7 5886
95 % 4 7 6546 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.1
PDBFlex
90 % 4 7 6542
70 % 4 7 6376
50 % 33 104 402
40 % 33 104 424
30 % 481 919 15
Entity #2 | Chains: B,D
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 372 632 2
95 % 401 676 3 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 1.0
PDBFlex
90 % 404 685 4
70 % 498 936 4
50 % 510 958 3
40 % 510 958 7
30 % 510 958 12

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures