Sequence Similarity Clusters for the Entities in PDB 1ONQ

Entity #1 | Chains: A,C
T-cell surface glycoprotein CD1a protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 7 5694
95 % 4 7 6359 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.1
PDBFlex
90 % 4 7 6345
70 % 4 7 6193
50 % 33 97 422
40 % 33 97 450
30 % 473 897 15
Entity #2 | Chains: B,D
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 366 618 2
95 % 395 662 3 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 1.0
PDBFlex
90 % 398 671 4
70 % 491 914 4
50 % 503 936 3
40 % 503 936 7
30 % 503 936 12

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.