Sequence Similarity Clusters for the Entities in PDB 1ONQ

Entity #1 | Chains: A,C
T-cell surface glycoprotein CD1a protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 7 5522
95 % 4 7 6184 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.0
PDBFlex
90 % 4 7 6167
70 % 4 7 6016
50 % 28 91 431
40 % 28 91 459
30 % 453 856 15
Entity #2 | Chains: B,D
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 355 593 2
95 % 384 636 3 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 0.9
PDBFlex
90 % 387 645 4
70 % 473 875 4
50 % 485 897 4
40 % 485 897 9
30 % 485 897 14

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.