Sequence Similarity Clusters for the Entities in PDB 1ONK

Entity #1 | Chains: A
Beta-galactoside specific lectin I A chain protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59330
95 % 1 2 30310
90 % 3 12 5863
70 % 3 17 3829
50 % 3 17 3716
40 % 25 79 625
30 % 115 210 214
Entity #2 | Chains: B
Galactose specific lectin I B chain protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 58786
95 % 3 12 5821 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 3 17 3883
70 % 3 17 3825
50 % 3 25 2271
40 % 14 47 1192
30 % 14 47 1174

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures