Sequence Similarity Clusters for the Entities in PDB 1ONK

Entity #1 | Chains: A
Beta-galactoside specific lectin I A chain protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 53688
95 % 1 2 28984 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 3 13 5473
70 % 3 18 3659
50 % 3 18 3581
40 % 89 170 283
30 % 116 212 229
Entity #2 | Chains: B
Galactose specific lectin I B chain protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 53687
95 % 3 13 5440 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 3 18 3716
70 % 3 18 3762
50 % 3 26 2268
40 % 14 48 1197
30 % 14 48 1184

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures