Sequence Similarity Clusters for the Entities in PDB 1ONK

Entity #1 | Chains: A
Beta-galactoside specific lectin I A chain protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 56902
95 % 1 2 29018 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 3 12 5574
70 % 3 17 3641
50 % 3 17 3556
40 % 25 77 616
30 % 114 207 210
Entity #2 | Chains: B
Galactose specific lectin I B chain protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 56379
95 % 3 12 5537 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 3 17 3702
70 % 3 17 3638
50 % 3 25 2166
40 % 14 47 1147
30 % 14 47 1127

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.