Sequence Similarity Clusters for the Entities in PDB 1ONK

Entity #1 | Chains: A
Beta-galactoside specific lectin I A chain protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 54067
95 % 1 2 29176 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 3 13 5515
70 % 3 18 3691
50 % 3 18 3602
40 % 89 170 283
30 % 116 212 232
Entity #2 | Chains: B
Galactose specific lectin I B chain protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 54066
95 % 3 13 5320 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 3 18 3753
70 % 3 18 3794
50 % 3 26 2288
40 % 14 48 1203
30 % 14 48 1191

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures