Sequence Similarity Clusters for the Entities in PDB 1ONK

Entity #1 | Chains: A
Beta-galactoside specific lectin I A chain protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 57724
95 % 1 2 29513 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 3 12 5677
70 % 3 17 3706
50 % 3 17 3612
40 % 25 77 625
30 % 115 208 213
Entity #2 | Chains: B
Galactose specific lectin I B chain protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 57186
95 % 3 12 5639 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 3 17 3751
70 % 3 17 3703
50 % 3 25 2187
40 % 14 47 1160
30 % 14 47 1140

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.