Sequence Similarity Clusters for the Entities in PDB 1OND

Entity #1 | Chains: 0
23S RIBOSOMAL RNA rna, length: 2880 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: Q
50S ribosomal protein L22 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 28 1180
95 % 16 30 1507
90 % 16 30 1543
70 % 16 30 1569
50 % 16 30 1612
40 % 16 30 1625
30 % 16 30 1590
Entity #3 | Chains: Z
50S ribosomal protein L32 protein, length: 60 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 34 955
95 % 16 34 1320
90 % 16 34 1342
70 % 16 34 1370
50 % 137 181 123
40 % 173 315 84
30 % 173 315 98

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.