Sequence Similarity Clusters for the Entities in PDB 1OND

Entity #1 | Chains: 0
23S RIBOSOMAL RNA rna, length: 2880 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: Q
50S ribosomal protein L22 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 28 1222
95 % 16 30 1535
90 % 16 30 1571
70 % 16 30 1602
50 % 16 30 1647
40 % 16 30 1659
30 % 16 30 1619
Entity #3 | Chains: Z
50S ribosomal protein L32 protein, length: 60 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 34 984
95 % 16 34 1357
90 % 16 34 1376
70 % 16 34 1397
50 % 137 181 130
40 % 174 319 86
30 % 174 319 101

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.