Sequence Similarity Clusters for the Entities in PDB 1OND

Entity #1 | Chains: 0
23S RIBOSOMAL RNA rna, length: 2880 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: Q
50S ribosomal protein L22 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 28 1197
95 % 16 30 1523
90 % 16 30 1558
70 % 16 30 1587
50 % 16 30 1627
40 % 16 30 1640
30 % 16 30 1603
Entity #3 | Chains: Z
50S ribosomal protein L32 protein, length: 60 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 34 974
95 % 16 34 1337
90 % 16 34 1356
70 % 16 34 1386
50 % 137 181 126
40 % 173 317 84
30 % 173 317 98

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.