Sequence Similarity Clusters for the Entities in PDB 1OMP

Entity #1 | Chains: A
D-MALTODEXTRIN BINDING PROTEIN protein, length: 370 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 20 60 353
95 % 28 112 218 Flexibility: Low
Max RMSD: 8.8, Avg RMSD: 2.1
PDBFlex
90 % 29 132 153
70 % 39 180 94
50 % 39 180 132
40 % 39 180 148
30 % 48 197 143

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.